GivingArc Nonprofit accounting Service

Nonprofit Bookkeeping in Los Angeles

Your Form 990 went out on May 15 and the board exhaled. In California that was one filing of four.

The Attorney General wanted Form RRF-1 the same day. The Franchise Tax Board wants its own return, which is not the 990 you already filed. And the Secretary of State has been waiting on a Statement of Information on a two-year cycle that ignores your fiscal year entirely.

That calendar is what nonprofit bookkeeping in Los Angeles has to keep, alongside the books themselves. It is the reason this page exists.

None of this is difficult. It is just easy to be unaware of, and the cost of being unaware is out of proportion to the work. What a California organization needs is a calendar with four dates on it, not one.

Key Takeaways

  • A California nonprofit corporation answers to four agencies, not one. The IRS gets Form 990. The Attorney General gets Form RRF-1. The Franchise Tax Board gets Form 199 or FTB 199N. The Secretary of State gets Form SI-100. Filing the federal return satisfies none of the others.
  • Form RRF-1 is due four months and fifteen days after your fiscal year ends, which is May 15 for calendar-year organizations. That is the same day as the federal 990, so it hides in plain sight.
  • Missing the annual RRF-1 can cost more than a late fee. The form itself warns that failure may result in loss of tax exemption and assessment of a minimum tax of $800, plus interest and penalties.
  • Small organizations do not escape. What triggers Form CT-TR-1, the annual treasurer’s report, is filing the federal Form 990-N: if you file the postcard with the IRS, the Registry wants CT-TR-1 with your RRF-1 instead of a return.
  • The Secretary of State runs on its own clock. Form SI-100 is due within 90 days of registering and then biennially, in a window tied to your month of registration rather than to your fiscal year, so it lines up with nothing else you file.

Four filings, four agencies, and a deadline that shares a date with the 990

Here is the recurring California calendar on one screen. Every figure below is taken from the agency’s own published requirements, checked September 2026: the Attorney General’s Registry of Charities and Fundraisers, the Franchise Tax Board, and the Secretary of State.

California filings for a 501(c)(3) nonprofit corporation: one initial registration, the annual cycle, and the audit threshold. Fees, thresholds and deadlines taken from each agency’s published requirements, September 2026. These rules carry exceptions; check your own facts against the agency pages linked above.
FilingAgencyWho files itWhenFee
Form CT-1Attorney General, Registry of Charities and FundraisersOrganizations holding assets for charitable purposes in California, one time. Entities organized primarily as a hospital, educational institution or religious organization are exempt from registration and annual reporting by law.Within 30 days of first receiving charitable assets$50
Form RRF-1Attorney General, Registry of Charities and FundraisersEvery registrant, every year, filed with a copy of the Form 990, 990-EZ or 990-PF you filed with the IRS, or with Form CT-TR-1 if you filed the federal 990-NFour months and fifteen days after the accounting period ends (May 15 for calendar-year filers). IRS extensions are honored.$25 to $1,200, by total revenue
FTB 199N or Form 199Franchise Tax Board199N when gross receipts are normally $50,000 or less; Form 199 above that. Private foundations file a complete Form 199 regardless of gross receipts.15th day of the 5th month after the tax year closes (May 15 for calendar-year filers)No filing fee for returns due on or after January 1, 2021
Form SI-100Secretary of StateCalifornia nonprofit corporationsWithin 90 days of registering, then biennially in a filing period made up of the anniversary month of registration and the five months before it$20
Audited financial statementsAttorney General, under the Nonprofit Integrity ActOrganizations reporting $2 million or more in total revenue. The statute measures gross revenue excluding government grants where the grantor requires an accounting (Gov. Code section 12586(e)(1)).With the annual RRF-1 renewalNo agency fee; you pay your auditor

Notice what the second and third rows share: May 15. The state deadline sits on the same day as the federal one, which is what makes it easy to lose. File the 990, feel finished, and the RRF-1 can sit unfiled for a year, then two.

The last row turns on size rather than on which return you file. Under California’s Nonprofit Integrity Act, an organization reporting $2 million or more in total revenue owes audited financial statements with its renewal. That threshold sits inside the range of organizations we work with, so it is worth knowing the year before you cross it rather than the month after.

The RRF-1 itself states the consequence on its first page: failure to submit the report annually may result in the loss of tax exemption and the assessment of a minimum tax of $800, plus interest, and fines or filing penalties. That is the teeth behind a form that takes an afternoon.

Under $50,000? California still wants a report

Filing the federal 990-N postcard can feel like the end of the year’s paperwork. In California it is the thing that creates more of it.

The rule is worth reading closely, because it is not a revenue test. The Registry says that if your organization is eligible to file, and does file, IRS Form 990-N, then it must file Form CT-TR-1, the Annual Treasurer’s Report, with its RRF-1. If instead you file a Form 990, 990-EZ or 990-PF with the IRS, you send that same return to the Registry and no CT-TR-1 is needed, even if you were eligible for the postcard. What you filed federally decides it.

CT-TR-1 is a short statement of assets, revenue by category and expenses by category. On the tax side, the same organization files FTB 199N, the California e-Postcard, a separate filing from the federal 990-N despite the similar name. Private foundations are the exception there: they file a complete Form 199 no matter how small their gross receipts are.

So a small California organization is looking at a federal return, an RRF-1 with its attachment, a Franchise Tax Board filing, and a Secretary of State statement every other year. That is the group this page is written for.

What we do each month

The monthly work is bookkeeping, but what you actually receive is a set of documents. Naming them is more useful than naming the service:

  • Statement of Activities and Statement of Financial Position. Reconciled monthly, not rebuilt in April.
  • Net assets with and without donor restrictions. Tracked as money arrives, with releases recorded when the purpose is met, so restricted balances are never a year-end reconstruction.
  • Grant budget-to-actual by funder. The report that answers what a funder asks: not what you spent, but what you spent of theirs.
  • A one-page board financial report. Written for readers who are not accountants.
  • Statement of Functional Expenses. The program, management and fundraising split that the Form 990 and your audited statements both need.
  • Year-end package. Form 990 or 990-EZ, Form RRF-1 with CT-TR-1 where it applies, Forms 1099-NEC and 1099-MISC in January, and the reconciliations and schedules an auditor asks for if you are audited.

We prepare for audits. We do not perform them. If your organization needs an audit, a review or a Single Audit, we build the file your auditor works from and answer their questions during fieldwork — the same package described in our audit preparation checklist. The wider set of annual obligations is laid out in our nonprofit compliance checklist.

What it costs

Our prices are published, with a calculator rather than a call. Monthly bookkeeping is priced by budget size and by how much restricted or grant tracking the work involves, and tax filings are priced per return, separately from bookkeeping. You can see the whole table and work out your own number on the pricing page.

Two things that page will tell you: what the number would be for an organization your size, and the point at which we are not the right answer.

Who this fits, and who it does not

A good fit

  • 501(c)(3) organizations with budgets roughly under $3 million
  • Grant-funded organizations that need restricted funds tracked as the money arrives
  • Boards that want a financial report they can actually read
  • Organizations preparing for a first audit or a Single Audit
  • Groups whose treasurer has been carrying the books alone

Not a fit

  • Organizations that need an audit performed; we prepare for audits, we do not conduct them
  • Private foundations, whose Form 990-PF work we do not take on
  • For-profit businesses
  • Engagements that are transaction entry only, without monthly statements or board reporting

Frequently Asked Questions

Common questions from small California nonprofits about state filings and monthly bookkeeping.

Yes. They are separate obligations. The Attorney General’s Registry of Charities and Fundraisers requires Form RRF-1 each year, filed together with a copy of the IRS return you actually filed. If you filed Form 990, 990-EZ or 990-PF, send that. If you filed the Form 990-N postcard, file Form CT-TR-1 instead. Filing the federal return alone leaves the state filing open.

No later than four months and fifteen days after the end of your accounting period, which is May 15 for a calendar-year organization. Extensions granted by the IRS for the Form 990 are honored by the Registry.

Registration is required within 30 days of first receiving charitable assets, using Form CT-1 with a $50 fee. Entities organized primarily as a hospital, educational institution or religious organization are exempt from registration by law, and other exemption requests are reviewed case by case. Organizations that discover they were never registered can register now through the Registry’s online filing service, which handles both the initial registration and the annual renewals that follow.

Usually, yes. Organizations with gross receipts normally $50,000 or less may file FTB 199N, the California e-Postcard. Above that threshold the filing is Form 199, due on the 15th day of the 5th month after your tax year closes. Private foundations file a complete Form 199 regardless of gross receipts, and churches and certain religious organizations are outside the Franchise Tax Board filing requirement altogether. Either filing is in addition to the federal 990, not instead of it.

We are based in Sherman Oaks and work with organizations across Los Angeles County, but the work is remote and we serve 501(c)(3) organizations nationwide. What is specific to California is the filing calendar described on this page, which we run for every California client.

Your books and your California filings on one calendar

We keep the monthly books and handle nonprofit bookkeeping and Form 990 preparation for small 501(c)(3) organizations, with the RRF-1 and the California returns filed on the same cycle.

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